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Targeted and shotgun metagenomic approaches provide different descriptions of dryland soil microbial communities in a manipulated field study
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Natural Prodcast Episode 18: A CSP Primer
… round of episodes. If you stick around for the next few months, you’re going to hear my last interview with my … for you, we sequenced thousands for you or thousands metagenomes. And I think also the quality that we provide. … we also have a lot of analysis pipelines, be it for, again, metagenome, metatranscriptomes for SNP analysis if somebody …
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Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
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Mining Metagenomes for Cas Proteins
… to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise fashion) has applications across many areas. In particular, gene … author Lucas Harrington was a graduate student from study senior author Jennifer Doudna’s lab, and he worked …
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Promoting the Power of Viral Metagenomics
… early 2020, people all over the world have been forced to confront the awesome power that viruses have to affect nearly … every aspect of our daily lives.  But for researchers who study viruses that infect organisms much smaller than … and nitrogen cycles. Currently one of the best ways to study such viruses is by sequencing the bulk DNA or RNA …
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Meeting report: International soil virus conference 2024
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Natural Prodcast Episode 23: Aaron Puri
… another episode of Natural Prodcast. Right now I’m working on this the afternoon of the day I’m due to release it, which is not ideal for … was jumping onto the I ntegrated Microbial Genomes and Metagenomes, the IMG platform that JGI has that really got … Natural Prodcast talks to Aaron Puri, from the University of Utah’s Chemistry Department. …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have … number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Sorghum stands out as a candidate …
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Natural Prodcast Episode 1: The Primer, Part 1
… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there, and welcome to the first … I’m definitely seeing why this is such an important area to study. Okay, what’s your third story?  DAN: The third story … ALISON: Hmm, yeah, I guess this relates to when I was studying heterotrophic bacteria: the core genome and the …
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A Plant Root Atlas for Tracking Developmental Trajectories
… zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling nearly … by neighboring cells in these processes.   One of the study’s co-authors is  Benjamin Cole , a research scientist … these efforts, which included two  workshops with resulting reports and a  perspective article .   …
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Meeting Report from the Genomic Standards Consortium (GSC) Workshop 8
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Meeting Report from the Genomic Standards Consortium (GSC) Workshops 6 and 7
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