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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … is one of the largest data repositories of its kind, with an interactive browser that allows algal scientists and … tools created by JGI researchers, including the Integrated Microbial Genomes and Microbiomes (IMG/M) system for …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … we nurture in our workplace and seek to establish with our stakeholders. The guiding principles for … on the effective management and strategic objectives of the microbial and metagenome programs. The committee serves as …
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Tanja Woyke
Woyke pursued her postdoctoral research at the DOE Joint Genome Institute in 2004. The main object of her research … primary interest and passion. Dr. Woyke stepped into the Microbial Genomics Program Lead position in 2009 and assumed … School of Natural Sciences since 2015. Prospective users with specific questions regarding their proposed research …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of … lysogeny, they can insinuate themselves inside the host’s genome, living quietly and replicating with their host … cycling of carbon, nitrogen, and other elements, better understanding the predator-prey dynamics in these …
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Making a Lichen Together
For the first time, a team has analyzed in parallel the genomes and transcriptomes of both partners to better understand lichen. The Impact Lichens are a model for … could help inform efforts at bioengineering symbiotic microbial consortia for bioenergy crops. And because lichens …
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User Programs
CLOSED ONGOING ONGOING Who Should Apply? Investigators with research projects that integrate the expertise and capabilities of multiple user facilities Investigators with DOE mission-relevant projects that call for expansive … who have not been a PI on any approved proposal with the JGI Investigators interested in translating genomic …
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Meeting Code of Conduct
… entire event. All participants are expected to be familiar with this policy. Our aim in hosting an event is to build a …
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MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
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Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus
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Special Initiatives & Programs
… are NOT eligible for BERSS support through the JGI (with the exception of DE-FOA-0003453, which is eligible for … breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. … The JGI … science.  Projects include de novo generation of genome data, assistance in interpreting and/or building on …
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Frequently Asked Questions: Proposal Submission
… at any career stage. Generally, most users are able to work with Berkeley Lab.  However, users from certain countries … on our YouTube channel as well as in this episode of our Genome Insider podcast.  You can also contact … range from raw sequence data to well-annotated assembled genomes to synthesized DNA constructs to metabolomics data, …
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Coassembly and binning of a twenty-year metagenomic time-series from Lake Mendota
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