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On the origin of bird’s nest fungi: Phylogenomic analyses of fungi in the Nidulariaceae (Agaricales, Basidiomycota)
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases … that unlike most flowering plants and animals, fungi lack gene body methylation. The analysis revealed that 5mC in …
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JGI Contributes Eight to 2023 Highly Cited Researchers list
… instrumental in the development of the Novel Metagenome Protein Families (NMPF) Catalog . Published in the October … Grigoriev’s recent work includes the discovery of anaerobic fungi’s ability to break down lignin , the hardiest of plant … which identified new genomes highlighting the diversity of white rot fungi in the genus Lentinula. Dan Rokhsar looked …
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Computationally Classifying Fungal Lifestyles
… were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … genomes of Dothideomycetes, the largest class of fungi, by lifestyles. The machine “learned” to identify data … over 100  Dothideomycetes genomes, just enough of a sample size to test if a computer algorithm could distinguish …
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Biology of Fungi and Their Bacterial Endosymbionts
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Biotechnological Innovations through Fungi
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Lignin deconstruction by anaerobic fungi
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake …
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Who We Are
… analyzing and harnessing genomic information from plants, fungi, algae, non-medical microbes, microbial communities, …
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Understanding Wildfire Recovery, Starting in Soil
… Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future … across a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, this study … bacterial genomes — mainly actinobacteria, as well as proteobacteria, bacteroidata, and patescibacteria. A major …
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Gene duplication, horizontal gene transfer, and trait trade-offs drive evolution of postfire resource acquisition in pyrophilous fungi
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Comparative genomics of pyrophilous fungi reveals a link between fire events and developmental genes
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