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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting … not treated with fungi, they used multiple approaches to look at gene expression in both plant cells and fungal … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab … at maximum) maintained by a workforce that numbered more than 100 at its peak, all the machines were switched off. Over … be reused or recycled. And so that is in part recycling and sustainability. But it’s also so we’re not wasting Lab …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of biosynthetic gene … have uncovered genomes for just a small fraction of Earth’s microbial diversity. Because most microbes cannot be … over 500,000 existing genomes available at that time. “Looking across the tree of life, it’s striking how many …
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Webinar: SIP technologies at EMSL and JGI
… The Environmental Molecular Sciences Laboratory (EMSL) and the Joint Genome Institute (JGI) provide access to a … for data once samples are in hand at JGI? A: It takes a few months to go from start to finish, i.e., QC to separation to … (LCMS).  We do a hydrolyzation of the DNA and we look and quantify the isotopomers. We estimate the overall …
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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come … and archaea breaking down plant matter. So since 2010, the JGI has supported researchers studying those microbial …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over the past billion … reveals just how much we still have to discover about Earth's fungal kingdom. The manuscript reviews about 200 … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE Office of Science …
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Doubling Down on Known Protein Families
… researchers confirm microbial diversity is wilder than ever. Imagine researchers exploring a dark room with a … approach to better understand microbial communities by looking at protein function within them. The work was led by … study also references data from the JGI’s  Genomes from Earth’s Microbiome , or GEM catalog). Then they removed any …
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Frequently Asked Questions: Project Management
… Eukaryotic projects: Kerrie Barry or Vivian Ng Prokaryotic projects: Tijana Glavina del Rio , Danielle Graham , or Miranda Harmon-Smith DNA Synthesis … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products categorized by Science Program.  …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… Gardeners and farmers around the country recognize that crop varieties grow best in certain regions. Most plant … in the natural environment,” he said. “There aren’t many efforts that have been able to study native perennial plants … Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean …
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JGI Announces 2026 Functional Genomics Recipients
… Pictured from left: [Above] Hanin Alzubaidy, Markus Covert, Sheel C. Dodani, Kathryn … function. Through our CSP Functional Genomics call , we look for projects that will leverage the JGI's biodesign and … to exploring how microbes metabolize and mobilize rare earth elements and other high-value resources. Enabled by …
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JGI User Executive Committee Expands
… Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan Baxter of the Danforth Center, Sundy Maurice of the … professor of translational plant science for dairy sustainability at the University of Wisconsin-Madison and a …
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Natural Prodcast Episode 23: Aaron Puri
… DAN: Hey, everybody. Welcome back for another episode of Natural Prodcast. Right now I’m working on this the afternoon … going in the future. So, then we were using these probes to look at host pathogen interactions mostly with like enteric … Episode Transcript … talked about carbon-fixing methylotrophs, quorum sensing, and inverse stable isotopic labeling. Catch up on previous …
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