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The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values … Coordinate messaging with the JLT, when speaking publicly about JGI or on behalf of the JGI. We stand stronger in …
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JGI Mural
… mural on the 3rd floor of the Integrative Genomics Building whimsically references dozens of iconic JGI contributions to … and energy genomics. Click on the images below to learn about the science depicted. The two-story JGI mural was … 25th anniversary and done by Berkeley-based artist Nigel Sussman. It was dedicated at the 2022 JGI Annual Meeting. …
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Metabolomics
… light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI Metabolomics Platform … profiles from diverse biological and environmental samples using advanced liquid chromatography mass spectrometry … and our methodology for metabolite analyses.  … Read more about our submission guidelines, what you can expect from …
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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
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Science Programs
The JGI’s Science Programs offer support to users and their research efforts.  JGI scientists lend their … of user projects, develop cutting edge approaches for and with users, and create computational tools and resources for … with the JGI on their research. Click below to learn more about our individual Science Programs.  … Deputy of Science …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature paper , … Biological and Environmental Research (BER) grants DE-SC0023084, DE-SC0021350, and DE-AC02-05CH11231. Partial support …
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Finding the Fermenters
… of fermentative prokaryotes. The Science Most organisms use oxygen to convert food into energy. However, in environments with little or no oxygen, life had … used the JGI’s GOLD and IMG data portals to get information about the genomes and genes of the organisms on the list. …
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Integrating Experimentation with Data
Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating Experimentation … data integration and modeling This three-day joint user meeting will feature insightful presentations, dynamic … Biological and Environmental Research (BER) program.   … About the Organizers … Stefani Ferreira , administrative …
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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also seeks out new approaches that utilize microfluidics/microdroplet … microbiome activity levels.This functional assay lets us move beyond cataloging the genes of microorganisms and …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, … in this Code of Conduct. … The UEC represents the JGI user community and is responsible for providing input and …
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