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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex sugarcane genome . The … now underway as part of the JGI Community Science Program (CSP), a critical factor in developing sugarcane as a … in part on these positive results, in 2017, JGI approved a CSP proposal from the international team to complete the …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… The JGI Engagement Webinar held November 5, 2020 (watch the  video … available through the  Community Science Program (CSP) . This includes mass spectrometry-based measurements of … . Q:  Are applicants outside of JGI eligible to apply for CSP?  I am at NIST. A: The JGI User Programs are designed to …
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How Filamentous Fungi Sense Food
… Tracing gene regulatory networks in the model fungus  Neurospora crassa . The Science A team led by researchers at the … We acknowledge the use of deletion strains generated by Grant … a Joint Genome Institute Community Science Program grant (CSP 982), and funds from the Fred E. Dickinson Chair of Wood …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel … This work was supported by the Plant-Microbe Interfaces program at the … 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science Foundation …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… Accepted proposals emphasize JGI interests in algae and … approved through the annual  Community Science Program (CSP) call of the U.S. Department of Energy (DOE) Joint … a small-scale white paper focused on duckweed through the  CSP New Investigator call . It is the first project to have …
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Natural Prodcast Episode 1: The Primer, Part 1
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a podcast about the science and scientists … Episode Transcript … This is the first episode of Natural Prodcast, a podcast produced by the US Department of …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and … deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads (PacBio) … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene … enabled in part through  JGI’s  Community Science Program (CSP) , as several approved proposals have contributed toward … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Tracing the Evolution of Shiitake Mushrooms
… the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get their name from the same place they often … sequencing were enabled by the Community Science Program (CSP) at the U.S. Department of Energy (DOE) Joint Genome … This research was supported by the NSF awards DEB- 1456588 to D.H. …
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JGI on the 2021 Highly Cited Researchers List
… Congratulations to the 2021 Highly Cited Researchers at the JGI! They are among those recognized by … a JGI Engagement Webinar on How to Successfully Apply for a CSP Proposal. She also co-organized the NeLLi 2021 …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… A group led by JGI scientists have made strides in improving and applying a method that allows … bacterial strains as part of the Community Science Program (CSP)  Functional Genomics proposal call. …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of Antarctic … has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his team compared two strains of … This work was supported by the Australian Research Council (DP150100244) and the Australian …
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