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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … for filamentous fungi, all of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow … sources, these fungi detect which complex chains are available; this information triggers pathways to determine which …
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Igor Grigoriev
… joined the JGI in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He … the JGI, a Senior Scientist at Lawrence Berkeley National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of …
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You Can Move, But You Can’t Hide
… Researchers at the JGI develop a tool to quickly and accurately identify … to replicate themselves and spread from cell to cell. Two of the most common forms of MGEs are viruses and plasmids. … of Science User Facility at Lawrence Berkeley National Laboratory (Berkeley Lab), with computing resources provided …
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Cold adaptive traits revealed by comparative genomic analysis of the eurypsychrophile Rhodococcus sp. JG3 isolated from high elevation McMurdo Dry Valley permafrost, Antarctica
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How Maize Makes An Antibiotic Cocktail
… Maize produces a family of compounds that protects it against infections — using surprisingly few … All plants make terpenoids, which carry out a diverse array of functions, including acting as antibiotics. But … NIFA AFRI (1758976 to A.H. and E.S.) for sesquiterpenoids, National Science Foundation Plant-Biotic Interactions Program …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Understanding the shared genetic toolkit of ancestral and present-day plants The Science In a recent  Nature Genetics paper , researchers focused on the full … Science User Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples … evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University has been … The work conducted by the U.S. Department of Energy Joint Genome Institute is supported by the Office …
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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… Congratulations to US Department of Energy (DOE) Joint Genome … and plasmid workflows for the National Microbiome Data Collaborative.  This award recognizes distinguished research …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and … of Illinois at Urbana-Champaign and at Argonne National Laboratory. Dr. Kyrpides’ research focus on Microbiome … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when … The microorganisms found there utilize a unique array of chemicals not typically found in oceans or soils.  A … of Science User Facility at Lawrence Berkeley National Laboratory, has unveiled these motility tools in hot spring  …
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Draft Genome of Janthinobacterium sp. RA13 Isolated from Lake Washington Sediment
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