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Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data

Transcriptome analysis of Brachypodium during fungal pathogen infection reveals both shared and distinct defense responses with wheat

Comparative analysis of the transcriptomes of Populus trichocarpa and Arabidopsis thaliana suggests extensive evolution of gene expression regulation in angiosperms

Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria

Construction of a medicinal leech transcriptome database and its application to the identification of leech homologs of neural and innate immune genes

Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly

Metagenomic Sequencing of an In Vitro-Simulated Microbial Community

High-resolution phylogenetic microbial community profiling

Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions

Synergistic interactions between anammox and dissimilatory nitrate reducing bacteria sustains reactor performance across variable nitrogen loading ratios

Kanwar Singh

Kanwar spends part of his time assisting JGI users by processing their single cell samples using our high throughput pipeline. He also explores new methods …

Protocols

Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation. JGI sample QC protocols can be found here . DNA Extraction …

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.