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Boosting Small Molecule Production in Super “Soup”
… of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … (BDO). To do so, the yeasts received fine-tuning of gene expression through genetic rewiring with CRISPR-Cas9 … rate of 0.9 grams per Liter-hour in a system optimized for developing small-scale prototypes. Additionally, the team …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
… are due on January 12, 2022. Faculty interested in developing proposals with JGI and Biosciences Area …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… mosses.  New research identifies sex chromosomes in the plant and illuminates the significant role sex plays in how … of the world’s soil carbon. The process to harvest energy-generating peat from these boggy wetlands produces an … U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… heat-resilient algae for industrial applications, and developing RNA barcoding systems to optimize microbial … approaches to unravel functional capabilities of plants, microbes and microbial communities, and … — questions relevant to the missions of the DOE’s Office of Biological and Environmental Research (BER) program. …
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Help from Citrus’ Bitter, Hardier Cousin
… orange ripens only bitter, intensely sour fruit. Yet this plant, native to China and now disseminated around the … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … annotating and analyzing the genome in order to find the genetic traits responsible for  P. trifoliata ’s hardiness, …
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Len Pennacchio
… Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and subsequently generated one of the first mouse models for this common … JGI’s primary point of contact for all High-Throughput Data Generation Platforms (Sequencing, Single Cell, Biodesign, …
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UC Merced Interns Reflect on Their JGI Summer Projects
… of Energy. Students also worked with their mentors to practice and develop presentation skills as well as build their … using natural language processing techniques to categorize genetic information. Learn more about their work here in a …
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JGIota: The Algae Nicknamed ‘Chlamy’
… – that’s managed to have a big impact. UC Berkeley plant biologist Sabeeha Merchant explains why she works on … and what it has to teach us about other organisms – like plants. [ Editor’s Note: Merchant is also a faculty …
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Rice SNP-seek database update: new SNPs, indels, and queries
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Genomic variation in 3,010 diverse accessions of Asian cultivated rice
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Defining a Pan-Genome for Antarctic Archaea
… shed light on the global biogeography in the haloarchaeal gene pool, a team led by University of New South Wales … collaboration with the DOE Joint Genome Institute, a DOE Office of Science User Facility, microbial ecologist Rick … Rauer Islands. Additionally, they compared metagenome data generated from samples collected at four Rauer lakes to …
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Katherine Louie
… Transitions in the Green Alga Chromochloris zofingiensis. Plant Cell. 2019;31: 579–601. 5. Erbilgin O, Rübel O, Louie … T, et al. MAGI: A Method for Metabolite Annotation and Gene Integration. ACS Chem Biol. 2019;14: 704–714. 6. … 470–480. 7. Louie KB, Bowen BP, McAlhany S, Huang Y, Price JC, Mao J-H, et al. Mass spectrometry imaging for in …
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