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Axel Visel
… at the JGI. Dr. Visel received his Ph.D. in 2004 from the Max Planck Institute in Hanover, Germany, where he … Merced. Dr. Visel also served as JGI Interim Director from March 2016 – March 2017.   … LA*, Visel A * (2012). Large-scale discovery of enhancers from human heart tissue . Nature Genetics  44, 89-93. Hess …
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A Sorghum Pangenome Opens More Doors to Discovery
… Danforth Plant Science Center. Collaborators benefitted from sequencing resources as part of the Community Science … a tool. It shows genetic variation across sorghum varieties from a much broader view than ever before. With this … to show that turning off the shattering gene resulted from single-base changes in DNA, called single nucleotide …
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Learning to Look
… now overhauls our perception of this virus group – from minor curiosities they become a prominent component of … with nearly all bacterial phyla across virtually every ecosystem.” By significantly expanding the known diversity … have CRISPR-Cas systems that incorporate short sequences from infecting viruses and phages to help the bacterial host …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… guest piece, postdoctoral researcher Joseph Napier from the Juenger lab and computational biologist Paul … by the number of 8X individuals that had been collected from field work. When viewing the full distribution of … several important questions. Where did the 8X variant come from? Did they arise multiple times or does their broad …
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Natural Prodcast Episode 1: The Primer, Part 1
… Laboratory. Being a User Facility means that scientists from all over the world bring us big problems related to … so it’s some kind of – Is it a compound that helps them from drying out? Or… What is it? DAN:  Yeah I don’t know! … You know, a billion dollar drug. But where taxol comes from is, from the bark of the yew tree, is where it was …
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Forming Scientific Connections and Building Community
… The 11th cohort of JGI-UC Merced interns pick highlights from their summer experiences. This year the U.S. Department … hosted three undergraduates and seven graduate students from UC Merced through their long standing internship … experience of living in another city, taking the shuttle from stop to stop and having responsibilities. I like the …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… BGCs make diverse molecules of value to both human and ecosystem health. But bacteria often fail to express their … relatives with the BGCs, JGI scientists could relieve BGCs from their former genetic repression, enabling scientists to …
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RECAP: Multi-Omic Journeys with 2023 JGI Annual Meeting Keynotes
… From August 21-23, 2023, attendees joined the JGI Annual … a competitive, peer-reviewed basis. Speakers and attendees from many corners of the globe joined  this hybrid event , … of organisms, and new views of how nutrients cycle through ecosystems. Of course, some of those collaborators, like …
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A Collaboration to Improve Plant Genome Annotations Across Species
… – the complete set of RNA molecules transcribed from all the genes within a cell or tissue at a specific … resource. To demonstrate that, we included datasets from two species, one of which is sweet sorghum Rio from a JGI Community Science Program project and another is …
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Frequently Asked Questions: Project Management
… The majority of JGI projects come from the user community. Find out about JGI’s calls for … the JGI User Agreement will be an authorized representative from your institution (usually a legal counsel …
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Special Initiatives & Programs
… with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … Researchers also study ways to develop valuable byproducts from lignin left over after biomass processing. Great Lakes …
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Webinar: PhycoCosm Tutorial
… and Answers 1.  Q(uestion): Why would your Tree ever differ from NCBI Taxonomy? A(nswer): If you find that our trees are …
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