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Introducing New Members of the JGI User Executive Committee
… JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell University, and Jana U’Ren (pronounced “you-wren”) of the …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes … Ocean Sciences and as Associate Adjunct Professor at the University of California, Merced. Woyke received a 2014 …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … Thomas Mock, a marine microbiologist at the University of East Anglia, leads this effort to understand … on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome …
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Tracking the Origins of Methane-Producing Microbes
… archaea are estimated to produce 500 million tons of methane a year, which is over half the total global … the National Academy of Sciences , researchers at Stanford University, the Chan Zuckerberg Biohub, and the U.S. … user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform …
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JGI Hosts GPU Hackathon in May
… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … and the code owners will be able to get assistance from mentors and a team to port their code to a new …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of microorganisms is incredibly useful for understanding the … in microbiome studies, these scientists (now at Stanford University) collaborated with the JGI. Working together, …
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Adam Reisselman on being a 2016 DOE Computational Science Graduate Fellow
… The Department of Energy's Computational Science Graduate Fellowship (DOE … meet the Nation's growing need for science and technology professionals with advanced computer skills. During the summer … of 2016,  DOE CGSF recipient Adam Riesselman of Harvard University worked with DOE JGI's Sam Deutsch. Learn more …
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Alabama A&M Interns Access An Abundance of Knowledge
… In 2024, the DOE Joint Genome Institute and Alabama A&M University piloted an internship program to bring students … mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … a senior biology major and currently attending Alabama A&M University, and I am an aspiring pediatric orthodontist. …
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Charting Progress toward Professional Goals
… Select interns look back on meaningful lessons from their summer experiences at the JGI Berkeley Lab offers a variety of programs to help inspire and train the … program, while Oliver Benelli applied through the University of California's  CalTeach initiative. During …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding of … in learning how these microbes have learned to adapt from marine to hypersaline conditions by studying the … biogeography in the haloarchaeal gene pool, a team led by University of New South Wales (UNSW)-Sydney professor Rick …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms … (Andrew Tritt of CRD and, independently, Ying Zhang of the University of Rhode Island), and to bin metagenomic contigs …
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Back to the Future! A Sorghum Story
… specifically to turn their biomass into sustainable biofuel and bioproducts. John Mullet, a biologist at Texas A&M University, tells us how sorghum’s historical — and literal …
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