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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… diversity of large and giant viruses. While the microbes in a single drop of water could outnumber a small city’s … genome tree of viral diversity – yet.” “We expect this to change with not only new metagenome datasets becoming available but also complementary single-cell sorting and sequencing of viruses together with their …
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Extracting the Secrets of Secondary Metabolites
… and releases toxins into the insect’s bloodstream that quickly kill the host. Understanding exactly how P. … edits affect functionality.  CRAGE allows for the transplanting of these BGCs from one organism into an alternate … That work by JGI researchers was published April 2022 in Cell Chemical Biology . When it comes to insect killer P. …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent … to monitor for and identify land use or water quality changes. Summary Rivers are key components of watershed … into such bodies of water before heading out to bays and oceans. While river microbes are critical to monitoring and …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… last 15 years, Ray Turner has been one constant for the Joint Genome Institute. On July 1, 2020, that all changed. Ray’s vigilant stewardship as JGI’s Operations … for Ray to wear and a red carnation lei flown in from Maui, care of the Admin Group’s Terri Bartolome. What …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) … He also works on automating intra-department data exchange and assists with large scale computations on R&D …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … has many components that make it useful for scientific inquiry: it shows a full phylogenetic tree of more than 100 … analysis of fungal genomes, and Phytozome for comparing plant genomes. Kuo and Grigoriev encourage scientists to …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Meta-omics datasets show that CRISPR-Cas systems determine mutualism or parasitism between some archaeal hosts and … key players in this deep biosphere. They have adapted to acquire carbon efficiently and convert it to usable organic … … This research was supported in part by the Allen Distinguished Investigator Program, through The Paul G. Allen …
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The Fungi That Survive In Antarctica
… could one day help other organisms survive hotter, drier climates. So University of Tuscia researchers Laura Selbmann and Claudia Coleine are working with scientists from around the world – and the JGI – to …
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JGI announces second round of 2023 New Investigator awardees
… [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin Hammer, Christina Hazard, Rachel Mackelprang, Brook Moyers, Mei, Ran,; … Scott, Chikae Tatsumi, Vojtech Tlaskal, Fernando Torralbo, Luis Felipe Valdez-Nuñez  The JGI is eager to work and share …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab … compare their work consistently. And EcoFABs also work well in the classroom. This episode, we visit Los Medanos Community College to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been studying …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay … UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has … Merced JGI Mentors : Tanja Woyke & Jessica Jarett, Single Cells Group “My experience at JGI has exposed me to the …
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