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Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth’s biomes
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Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria
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Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean
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Aerobic bacteria and archaea tend to have larger and more versatile genomes
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Polynucleobacter necessarius, a model for genome reduction in both free-living and symbiotic bacteria
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Seasonal Dynamics of Core Fungi in the Switchgrass Phyllosphere, and Co-Occurrence with Leaf Bacteria
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Metagenomics untangles potential adaptations of Antarctic endolithic bacteria at the fringe of habitability
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CRAGE-RB-PI-seq reveals transcriptional dynamics of plant-associated bacteria during root colonization
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, … by lifestyles. The machine “learned” to identify data generated in part through the 1000 Fungal Genomes Project, … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping strategy called RH-Seq can identify genes … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute with Dan Rokhsar, who … how crops and model organisms may evolve.  Determining the genetic codes of plants is often challenging because in many …
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