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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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Genes and genome‐resolved metagenomics reveal the microbial functional make up of Amazon peatlands under geochemical gradients
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Drought re-routes soil microbial carbon metabolism towards emission of volatile metabolites in an artificial tropical rainforest
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Methane Cycling Microbial Community Characteristics: Comparing Natural, Actively Extracted, Restored and Unrestored Boreal Peatlands
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The Dynamic Influence of Subsurface Geological Processes on the Assembly and Diversification of Thermophilic Microbial Communities in Continental Hydrothermal Systems
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50-year fire legacy regulates soil microbial carbon and nutrient cycling responses to new fire
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Evolution of a Fungal Gene Expression Regulator
… date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can … Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, and others like it, are uncovering … technologies for producing both reference genomes and epigenomics, researchers are unwrapping complex mechanisms of …
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Leo Baumgart
… and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His team is … plant tissues. Dr. Baumgart focuses on expanding functional genomics capabilities through process automation and method … DSM12444 transcription factors." Microbiology Resource Announcements 14, no. 8 (2025): e00260-25. Cassol, …
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How Microbes Can Protect Plants in Drier Straits
… proposal was recently approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to drought. …
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JGIota: Looking Back at How Cow Rumen Samples Landed on a Syllabus
… 2011, JGI-supported researchers published a paper in the journal Science . It detailed how they’d used metagenomics to identify over 27,000 microbial genes. The data from that study is now used across …
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MGM Workshop at Fisabio Summer School 2025
… professionals of biology, biomedical research, the health sciences and related fields who are interested in learning … and sharing concepts, tools and research results in genomics, metagenomics and the human microbiome. The … will be devoted to training in the use of the Integrated Microbial Genomes & Microbiomes (IMG/M) system, presented by …
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JGI announces first round of 2023 New Investigator awardees
… The JGI is eager to work and share our tools with a widening circle of researchers. The JGI is … That’s why twice each year we look for novel research projects — aligned with DOE missions and from PIs who have … —  through the  New Investigator call under our Community Science Program.  Below find a list of the first 10 …
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