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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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Enhanced terrestrial Fe(II) mobilization identified through a novel mechanism of microbially driven cave formation in Fe(III)-rich rocks
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… and management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and … has changed our understanding of the microbiome and the microbial sciences field. Roux will be recognized at the … His project, “Characterizing Virus-Driven Alterations of Microbial Metabolism in Model Soil Ecosystems,” uses a …
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Matt Blow
Symbiosis with  Medicago spp. Msystems 7 (1), e01092-21 3. Baumgart et al. 2021. Persistence and plasticity … of Prokaryotes. PLoS Genet 122:e1005854. Nord Et Al. 2013. Rapid and Pervasive Turnover of Mammalian Enhancer … During Development. Cell 155:1521-31. Attanasio et al. 2013. Fine Tuning of Craniofacial Morphology by Distant-Acting …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
Mouncey. Using CRAGE, JGI has established a portfolio of microbial hosts that users can select to be engineered. … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in … to inform the engineering of stable, synthetic microbial communities to take advantage of their joint metabolisms. …
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Hiroshi Otani
… of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New keys to unlock the treasure trove of microbial natural products. Nat Rev Microbiol. 2021 Nov;19(11):683. Mouncey NJ, Otani H, Udwary D, Yoshikuni Y. New …
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Evolution of a Fungal Gene Expression Regulator
… sequence can lead to changes in protein structures and functions, but the DNA bases themselves can also be … least one reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of … of life, they tracked the evolution of 5mC pathways across 528 species. The researchers found that unlike most flowering …
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The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… support understanding of plants, microbes and environmental communities that have relevance for DOE’s bioenergy and … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in … “For [DOE’s Biological and Environmental Research] and the communities of science you serve and enable, it’s really the …
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JGI Welcomes New UEC Members
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Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
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