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JGI@25: Cow Rumen and the Early Days of Metagenomics
… environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their potential to … to find the enzymes that make the rumen such an efficient biomass-degrading environment and transfer that ability into …
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When “The Blob” Made It Hotter Under the Water
… flux in marine microbial communities. Using the JGI-generated data, Sachia Traving, a former postdoctoral fellow …
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Inspiring STEM Careers Through a Hands-on Everglades Microbiome Study
… ranging from wetlands to tree islands to cattails. In 2018, the US Department of Energy (DOE) Joint Genome … scientific knowledge, they are also equipping the next generation of scientists that will help shape all of our … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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Antiquaquibacter oligotrophicus gen. nov., sp. nov., a novel oligotrophic bacterium from groundwater
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… more than 8,500 publicly available metagenome datasets generated from sampling sites around the world, including … out and characterize uncultivated viruses. For instance, a 2018 study from a JGI-led team uncovered giant viruses in … expanded 10-fold from just 205 genomes, redefining the phylogenetic tree of giant viruses. Metabolic Reprogramming a …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
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A Plantiful Future: Xiaohan Yang
… Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of …
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Introducing New Members of the JGI User Executive Committee
… use-restricted data without contacting the lab that generated that data,” he said in his candidate statement. “I … cellular phenotypes and genotypes. Pawlowska, who studies fungal-bacterial symbiotic systems, noted that she would … ecological and evolutionary factors shaping the assembly of fungal endophytes across land plants and lichens, mentioned …
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Finding the Fermenters
… at the University of California, Davis and UC Santa Barbara generated a list of prokaryotes with fermentative metabolism … IMG data portals to get information about the genomes and genes of the organisms on the list. They also searched IMG/M for all protein-coding genes belonging to each genome. The final dataset – …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… analysis leads to identification of biosynthetic gene clusters for novel secondary metabolites for multiple … diversity. The article adds to the compendium generated as part of Genomic Encyclopedia of Bacteria and … of these bacterial and archaeal genome sequences have been generated using techniques that the JGI has pioneered, …
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Ben Bowen
… to HAMLET-induced death; c-Myc and glycolysis. Oncogene, 30(48), 4765–4779. Google Scholar. …
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A Step Toward Controlling Soybean Rust
… genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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