Results

IMG-ABC: new features for bacterial secondary metabolism analysis and targeted biosynthetic gene cluster discovery in thousands of microbial genomes
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Linking microbial Sphagnum degradation and acetate mineralization in acidic peat bogs: from global insights to a genome-centric case study
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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Microfabrication of a Chamber for High-Resolution, In Situ Imaging of the Whole Root for Plant–Microbe Interactions
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GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems
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Katherine Louie
… 1000s of metabolite standards, and development of high-throughput untargeted analysis pipelines.  Beyond profiling … Rocha UN, Shi S, et al. Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly. Nat Microbiol. 2018;3: …
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Complete genome sequence of DSM 30083T, the type strain (U5/41T) of Escherichia coli, and a proposal for delineating subspecies in microbial taxonomy
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… spotlighted the metabolomic analysis capability available through the  Community Science Program (CSP) . This includes … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or … and transcriptomic analyses? A:  This can be requested through the  JGI/EMSL FICUS user program .  Q:  Is it …
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Yasuo Yoshikuni
… sugar polymers in macroalgae and developing the first microbial platform technologies unlocking the potential of … to low pH in multiple Issatchenkia orientalis strains., Microbial Spectrum , 2024 Wu et al.Metabolic engineering of …
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