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… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the … computational efforts directed towards the sequencing, annotation, and analysis of three human chromosomes. After … and Development after his research interests shifted from condensed matter physics to computational biology, …

… JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … around the world, the JGI Genome Portal is a critical resource — it provides access to all of JGI’s genomic databases and tools,” noted  Kjiersten Fagnan , JGI’s Chief Informatics Officer. …

… microbial communities across five oceanic regions. In doing so, they found a high degree of variability in the types of … and other microorganisms that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected 40 samples from five oceanic regions to better understand how these …

… 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Maximizing … podcast minisode.)  In 2016, the JGI accepted a proposal from Sebastien Duplessis of the French National Institute …

… the genetic make-up of specific uncultivated microbes from complex environmental samples. The Science A team led … tested and deployed a pipeline to first target cells from communities of uncultivated microbes, and then … focus on specific microbes within metagenome samples and associate their sequences with their roles within their …

… 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Viruses are … host to replicate. Sequencing genetic material directly from samples sidesteps these challenges, since it doesn’t …

… scientists are now getting more complete genomic results from single cells. The Science Studying the  genomes of … the microbiome of the earth, but most species do not grow easily in the lab. To access the genomes of … genome sequencing involves taking a single cell and isolating it for analysis. Once it’s alone, the cell breaks …

… The Science If it looks like a duck and quacks like a duck, so the adage goes, it must be a duck. But if the duck gets … like one, is it still a duck? For a team led by researchers from The Ohio State University and the University of … virocells that are metabolically and functionally different from uninfected cells. Duhaime and Sullivan are …

… For bacteria, that salty, slightly stinky air is a rich source of the sulfur they need to grow and divide. Similar … — nitrogenases — other enzymatic machinery harvests sulfur from gaseous organic sulfur compounds in the atmosphere.  … conditions. However, their experiments also highlighted another component, an accessory protein called MarS. MarS …

… 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. Oh, the magical … Since one of the challenges of developing alternative fuels from plants is the high cost and resource requirements of …