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… Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … Scientist at Lawrence Berkeley Laboratory, and Adjunct Professor at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where he uncovered the …

… Nov. 2: Getting Credit for Scientific Contributions of Any Size What is considered to be a scientific … students (and their mentors) how to begin establishing a professional presence through getting credit for any scientific contribution they make, whether as part of a course or internship, and before ever publishing a …

… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … would it be possible to add a feature to look for synteny of the target genome with itself, to identify regions that …

… on using metabolomics to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the development and application of advanced mass spectrometry approaches and model … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …

… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … that they were a ‘macro’ microbe was fascinating!” “She understood that it was a bacterium belonging to the genus … bacterium was doing in the mangroves. “Mangroves and their microbiomes are important ecosystems for carbon cycling . If …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … which now hosts upwards of 250 plant genomes and has been under active development for over 5 years, provides users …

… In this short video, UC Merced undergraduate and graduate students share how their summer … And also specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the … now I think I can lead a team. So maybe I go to industry field, I lead a research team. I think, yeah, that’s maybe …

… ( CRAGE ). CRAGE enables scientists to insert large pieces of DNA (up to 60 kb) in a single step, directly into the genome. “CRAGE is central to our ability to offer host-engineering for our users,” says JGI Director … have also harnessed CRAGE to create a plant-fertilizing microbiome. In work  reported in  Applied and Environmental …

… For the first time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. The Science The … is a superorganism: one being that is actually comprised of two (or more) participants. One is a fungus (usually …

… with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory protein. Researchers demonstrated … factors and even other organisms can fuel a deeper understanding of these transcriptional regulatory networks. …

… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … and get the other’ – but, that was not a known fact in the field whatsoever.” Focusing on Carbon Flux and Future … can be enabled by this technology, but also what we can understand through this technology.” “This is a fantastic …

…   The Science Scientists have fully decoded the genome of an oil-producing green alga, and demonstrated precise … gene targeting in the genome in the November 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid … Research (BER) program to advance a fundamental understanding of genome biology, and develop genome-scale …