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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… they set out to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to Africa to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint … Susannah Tringe, JGI User Programs Deputy. “These new CSP projects accelerate our efforts to characterize … same mistakes,” he said. “Although in my specific case the projects are different for the two proposals, I can see the …
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Charting Progress toward Professional Goals
… researcher who serves as their mentor. By contributing to projects that will help them build skills and tools, they … program at UC Berkeley. Sally Liao came in through the DOE  Science Undergraduate Laboratory Internship program, while … results not being the most promising. Going into the project, like, I kind of knew that my projects were …
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Toasting to the 2020 JGI-UC Merced Summer Internship Program
… one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or … in some cases daily, check-ins with their mentors to ensure projects progressed despite the challenges of remote work. …
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Gotta Catch 'Em Gall
… In this episode, hear from Kasey and Patrick about how this project unfolded, and how they worked with the JGI's …
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JGI@25: Strengthening Soybean
… our collaborations and capabilities to enable great science that will help solve energy and environmental … source of both protein and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, including a number of projects that point to the potential of seed oils as …
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JGIota: A Tool to Find the Nomadic Genes that Help Microbes Adapt - geNomad
… behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
… the  “Facilities Integrating Collaborations for User Science” (FICUS) call between the JGI and the  Environmental Molecular Sciences Laboratory (EMSL) , successful applicants can also … assignable assets program. Q: For a NEON Assignable Assets project, does the data produced become public as well? A:  …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … noted study senior author  Tanja Woyke , who heads JGI’s  Microbial Program . The team mined more than 8,500 publicly … and the Georgia Institute of Technology focused on microbial communities from freshwater ecosystems, including, …
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The Soil Blooms Green
… green growth appears on top of farmers’ fields: a microbial community that might be quietly improving the …
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Scaling Up Existing Skill Sets
… anyone in the Institute to get feedback and insights on the project and everyone’s willingness to guide or mentor me … Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial Interactions What effect has your summer … one that incorporates big data. A large part of my project this summer was utilizing a high performance cluster …
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… our collaborations and capabilities to enable great science that will help solve energy and environmental … JGI-supported researchers published a paper in the journal Science. It detailed how they’d used metagenomics — a … from environmental samples — to identify over 27,000 microbial genes. These genes were identified based on their …
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