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Transposon Mutagenesis Paired with Deep Sequencing of Caulobacter crescentus under Uranium Stress Reveals Genes Essential for Detoxification and Stress Tolerance
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… discoveries. Unlocking the intricate details of life’s genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  now available to the global research … observed in nature. Because of its enhanced neural network architecture, GenomeOcean has shown improved …
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An Integrated Dataset to Understand Ecosystem Interaction
… Dubbed “the” bioenergy tree, poplars are known for their genetic diversity. They hold economic value as both biofuel … streambanks, wildlife habitats and water-quality regulation. Focusing on the rhizosphere and interactions … mechanisms for adaptation within the trees. The data set generated is 25 terabytes in size. Resources for genomic …
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Variation in Adult Plant Phenotypes and Partitioning among Seed and Stem-Borne Roots across Brachypodium distachyon Accessions to Exploit in Breeding Cereals for Well-Watered and Drought Environments  
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A sorghum genome-wide association study (GWAS) identifies a WRKY transcription factor as a candidate gene underlying sugarcane aphid (Melanaphis sacchari) resistance
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Restoration of biofuel production levels and increased tolerance under ionic liquid stress is enabled by a mutation in the essential Escherichia coli gene cydC
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Does time matter? Intraspecific diversity of ribosomal RNA genes in lineages of the allopolyploid model grass Brachypodium hybridum with different evolutionary ages
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Four Researchers Join JGI User Executive Committee
… to the development of bio-based products and next-generation technologies, and toward a secure energy … Program and the Microbial Program over the past decade in gene regulatory network projects supported by the CSP, and as part of …
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Evolution of a multi‐step phosphorelay signal transduction system in Ensifer: recruitment of the sigma factor RpoN and a novel enhancer‐binding protein triggers acid‐activated gene expression
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A Synthetic Gene Library Yields a Previously Unknown Glycoside Phosphorylase That Degrades and Assembles Poly-β-1,3-GlcNAc, Completing the Suite of β‑Linked GlcNAc Polysaccharides
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science Mobile genetic elements (MGEs) are genetic entities that seek to … one is marker gene-based, and the second is a neural network approach. The tool was employed to build version 4 …
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