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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… to enable large-scale analysis. The story of a massive metagenome assembly for a time-series experiment from the … Lake Mendota is told as part of a three-part series of our  Genome Insider podcast .    ( Subscribe to Genome Insider on  Apple Podcasts ,  Spotify or wherever you …
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How to Submit Sequencing Samples
… Project Manager (PM) a list of organism names (or for metagenomes, sample names).  Need help naming your organisms? …
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Leo Baumgart
… Dr. Baumgart joined the DOE Joint Genome Institute in 2018, following his doctoral research in …
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Global Diversity and Biogeography of the Zostera marina Mycobiome
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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JGI@25: Cow Rumen and the Early Days of Metagenomics
… coherent pieces called contigs — into genes and even into genomes — from these environmental samples,” said Matthias … how JGI data supports higher education in this JGIota , a Genome Insider podcast minisode.)  “The ultimate target has …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … they called the Hungate1000, a catalog of 410 rumen microbe genomes. The project relied upon resources from laboratories … Sinead Leahy and the JGI’s Rekha Seshadri in this JGIota, a Genome Insider podcast minisode. To date it is the single …
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Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes
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Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans
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Genome Streamlining, Proteorhodopsin, and Organic Nitrogen Metabolism in Freshwater Nitrifiers
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Genomic variation within the maize stiff‐stalk heterotic germplasm pool
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Optimizing de novo genome assembly from PCR-amplified metagenomes
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