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Adopt-A-Genome
… In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani … Angela and Mark Soghomonian share what it was like to take on one of these genomes.  …
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The Megadata of Lake Mendota - Part 1: Many, Many Mers
… Lake Mendota sits right next to the University of Wisconsin, Madison. And Trina McMahon's … the microbes of that lake for over 20 years, to understand how the freshwater ecosystem works.  So a few years ago, … to analyze 500 metagenomes, it was the biggest project the JGI had ever put together.  The next 3 episodes are the …
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Micro-Scale Applications Group
… The Micro-Scale Applications group explores the genetic makeup of … that utilize microfluidics/microdroplet technology in order to enhance the quality of single-cell genomes and directly link functional information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope …
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The endosymbiotic box of protective tricks
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the … approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral … Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université Blaise Pascal, France Ph.D. in …
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Ben Bowen
… Specializing in mass spectrometry-centered projects, Dr. Bowen’s work focuses on developing … the DOE’s Biological and Environmental Research user community in their bioenergy and environmental objectives. … State University, Tempe, Chemical Engineering Post-doctoral positions – Arizona State University, Bioengineering & …
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Triggering Morel Fruiting
… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on … the fruiting-related decomposition mechanisms of morel with multi-omic approaches, our results revealed a striking …
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Annual Genomics of Energy & Environment Meeting
… you for joining us at the 2024 DOE Joint Genome Institute (JGI) Annual Genomics of Energy & Environment Meeting! The … gathering of leaders from diverse disciplines to highlight how they are addressing the world’s most pressing energy and … peer-reviewed basis to the worldwide scientific community can advance your research goals. Keynotes: M. …
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Robert Bowers
… Bob uses single-cell genomics and metagenomics to explore how microbes influence people and the … This includes studying the diversity, physiology and community ecology of microbes sampled from the natural …
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Filling in the Plant Tree of Life
… What if we understood plants and how they adapt to their … are from narrow swaths of the plant tree of life. One project aims to change that. …
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Neha Varghese
… and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and … and implementation of microservices in conjunction with the IMG platform. …
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Accelerating Metagenomics Discoveries with Deep Learning
… Lab) and other institutions shared their works-in-progress with 86 participants in an online workshop to harness deep … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … in order to create more useful tools for the bioinformatics community. Other work presented at the workshop included how …
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