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JGI@25: Solving the Mystery of the Missing Oil
… in 2022, we have revisited a number of notable achievements that showcase our collaborations and capabilities to enable great science that will help solve energy and environmental challenges. … To find an explanation, his team tracked the thousands of bacterial and archaeal species using a DNA-based array …
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Mindfully Moving JGI
… sequencing machines at maximum) maintained by a workforce that numbered more than 100 at its peak, all the machines … JGI’s Operations Deputy Ray Turner. How extensive? Consider that the process of moving 250 people and their equipment … spaces, a decluttering method focused on keeping only items that bring joy (and are necessary for JGI’s operations). At …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… of the technical aspect of her project, Hour mentioned that she had gained knowledge in bioinformatics and machine … Liu Project:  Promoter Characterization of the Bacillota Bacterial Phylum Saray Maeda Mentors: Jonelle Basso, Heejung … of a computational pipeline to detect tailocin from bacterial growth Yibing Wang Mentors: Tomoya Honda, Dung Mai …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… Multiple Displacement Amplification, and most genomes that were acquired through it were usually only around 30% … 80% in most cases. The Impact PTA is a refined capability that is desirable in the microbiome field due to its high … with the JGI. Working together, they found most bacterial genomes from water and soil communities were at …
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Charting Progress toward Professional Goals
… who serves as their mentor. By contributing to projects that will help them build skills and tools, they gain … thinking about science communication, like prepping for that. But the one thing I've learned so far with like, … presenting to like, my group and different other people is that it's really important to know who you're talking to …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Axel Visel
… Computational Biology , Nucleic Acids Research . Over 80 publications in peer-reviewed journals including Nature, … Selected Publications …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… lab. And I find this really valuable because in this time that I’ve been in my PhD program, I’ve been really focused … specifically, it sparked my interest in bioformatics, so that’s what I’m gonna take with me to the future.  Shari … so I was kind of worried coming into the, the internship that maybe I didn’t have as good of skills as somebody else …
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Ancient Algae Reveal Secrets of Plant Evolution
… Research uncovers the genetic foundations that helped plants conquer land over 600 million years ago. … ultimately allowing them to adapt to life on land. Learning that these genetic tools existed in close algal relatives  … agriculture and clean energy. These evolutionary strategies that helped plants thrive under challenging conditions could …
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JGIota: The Algae Nicknamed ‘Chlamy’
… a tiny, single-celled alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant …
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First Monoploid Reference Sequence of Sugarcane
… monoploid reference sequence using a targeted approach that focused on the gene rich part of the genome by … different variants on different chromosomes, information that can be used to assemble a more complex and more … To create this reference sequence, the team relied on bacterial artificial chromosomes (BACs), vectors that can …
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Alabama A&M Interns Access An Abundance of Knowledge
… the soil. And I’m specifically working with a grass plant that’s similar to wheat and rice called Brachypodium … nice and willing to lend a helping hand at any opportunity that they have. Any questions that I may have, everyone has been able to jump to and …
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