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Mindfully Moving JGI
… JGI is in the process of shifting its operations from Walnut Creek to the heart of the Berkeley Lab campus. By Friday, October 18, the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science . …
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Expanding Virophage Diversity
… DNA genomes that co-infect eukaryotic cells along with giant viruses. Virophages are small viruses with … in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference … chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the dynamics of gene … Innovation, which is supported by the U.S. Department of Energy, Office of Science, Office of Biological and …
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Virus-Microbe Interactions of Mud Island Mangroves
… a graduate student in Brett Baker’s lab at the University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… tools and data hub for NIH program. While the microbes in, on and around Earth outnumber the stars in the Milky Way, … viruses outnumber the microbes by at least another order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility located at Lawrence Berkeley …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. … role in soil carbon storage. Summary There are three types of fungal saprotrophs in the forest. White rot can break … The project was funded by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As …   ALISON:  Hey! I’m Alison Takemura at the US Department of Energy Joint Genome Institute, or JGI.  Two special days … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … analyzing the enzymes present in the complex organic matrix of the forest floor, a team of researchers have found that … these distractions. Combining genome and transcriptome information allowed the team to have a much more comprehensive …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… A new view into a symbiosis could offer benefits to address climate change: pulling atmospheric carbon into soil and boosting biofuel feedstocks with less … this spatial transcriptomics data captured molecular information from both plant cells and fungal cells. “Because …
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Dealing with Drought: Uncovering Sorghum’s Secrets
… Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of drooping stalks and cracked earth are becoming common … D.C.-D., R.O., J.W.T., J.D., J.P.V., P.G.L., and E.P.); Gordon and Betty Moore Foundation Grant GBMF3834 and Alfred P. Sloan Foundation Grant 2013-10-27 (to the University of California, Berkeley [N.V.]); L’Ecole Normale …
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JGI Hosts GPU Hackathon in May
… high-performance computing resources, an upcoming hackathon led by the Oak Ridge Leadership Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … scroll down to the Team Proposal tab to submit. For more information about the 2019 GPU Hackathons, go to:  …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Joint Genome Institute works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led … the gene function and add additional biological information. As I’ve said earlier, 16 to 56 percent of plant …
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