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Ian Blaby
… design and assembly, strain engineering and bioinformatic tool development/data analysis for synthetic biology and … profiling of a synchronized diurnal transcriptome from Chlamydomonas reinhardtii reveals continuous cell and … al., Experimental evolution of a facultative thermophile from a mesophilic ancestor. Applied and environmental …
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JGI@25: Using Team Science to Build Communities Around Data
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … these initial efforts: Spatafora and Jason Stajich from UC Riverside would focus on broad sampling of early … 100 genomes in progress and 200 that are pending samples from users. Roughly 300 have been published. Spatafora said …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome Biology Program and the development of … et al. (2021) Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome. Nat Microbiol . 6(7):960-970. … ASM’s USFCC/J. Roger Porter Award (2018) Honorary Doctorate from the Aristotle University of Thessaloniki (2017) The van …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the sex … shrub willow have been sequenced with sufficient resolution to analyze their structure. Scientists found both a gene … the study’s international team, which included scientists from Oak Ridge National Laboratory and the U.S. Department …
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Annual Genomics of Energy & Environment Meeting
Meeting! The JGI convenes this annual gathering of leaders from diverse disciplines to highlight how they are addressing the world’s most pressing energy and environmental challenges.  …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
Bacterial enzymes play second fiddle to those from fungi when it comes to breaking down tough … are not specific enough for a microbial community like that from a temperate coniferous forest floor — which Baldrian’s …
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JGI@25: Building a Better Bean
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … the common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an … Six races of the common were identified, three from each of the common bean’s two points of origin in …
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
… at the conference venue This inaugural event will bring together researchers across major ecosystems and disciplines who are developing and applying laboratory ecosystems to help transition microbiome science from largely observational to reproducible mechanistic …
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation cycle. … system. The Impact Photosynthesis harnesses carbon captured from the atmosphere in a process that generates energy. The … pathway that would more efficiently remove carbon from the atmosphere than current natural processes and use …
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A Complex Confection Decoded: Sugarcane Reference Genome
… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science Considered the world’s most harvested crop by tonnage, sugarcane accounts … to future environmental conditions. Additionally, insights from the genome could help scale sustainable sugarcane …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science … changing planet. In this short audio production, we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the … gradient. So, the movement of water through stomata is really important. And when those stomata are open, it’s the …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a … the third is determining the 5’-ends by 5’-end sequencing, from which those promoter sequences recognized by a given … experimentally verified in S. coelicolor . With results from the research, RIViT-seq data have increased the …
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