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The GC-Rich Mitochondrial and Plastid Genomes of the Green Alga Coccomyxa Give Insight into the Evolution of Organelle DNA Nucleotide Landscape
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Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution
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Gene duplication, horizontal gene transfer, and trait trade-offs drive evolution of postfire resource acquisition in pyrophilous fungi
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly … all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … Institute (JGI), a DOE Office of Science user facility at Berkeley Lab, addressed this gap in a recent article …
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Team Science Reveals Important Protein in Poplar
… crops The Science Scientists at Brookhaven National Laboratory (BNL) led a team that  identified a protein … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). because of its … and cell wall structure in the poplar plants with help from scientists at the NSLS-II.  These findings lay the …
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Defining a Pan-Genome for Antarctic Archaea
… are interested in learning how these microbes have learned to adapt from marine to hypersaline conditions by studying the … their adaptations offers insights into microbial evolution, as well as how Antarctic microbial communities … was supported by the Australian Research Council (DP150100244) and the Australian Antarctic Science program (project …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of … analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & sequencing Q(uestion): How much … of the library. 6mA and 4mC (~50x depth), 5mC (~250x depth required). Methylation detection currently only …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) of the U.S. Department … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). They are: Ivan … biology tools that can help produce value-added products from these systems. He’s worked with the JGI on various CSP …
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Rearrangement of a Large Novel Pseudomonas aeruginosa Gene Island in Strains Isolated from a Patient Developing Ventilator-Associated Pneumonia
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Talaromyces borbonicus, sp. nov., a novel fungus from biodegraded Arundo donax with potential abilities in lignocellulose conversion
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Expression and regulatory asymmetry of retained Arabidopsis thaliana transcription factor genes derived from whole genome duplication
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Whole-Genome rVISTA: a tool to determine enrichment of transcription factor binding sites in gene promoters from transcriptomic data
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