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Marine Microbe Contains Multitudes
… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … transforming, and respiring carbon. Understanding the metabolisms that SAR324 and other microbes use could inform … #3777 (to EFD). The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science …
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Draft genome sequences of two bacterial type strains isolated from a methanogenic bioreactor: Ruminiclostridium sufflavum DSM 19573T and Anaerosphaera aminiphila DSM 21120T
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 … As well as the seminal Human Genome Project DOE Chromosome publications: The DNA sequence and biology of human …
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Trent Northen
… to link genomes with environments to understand how webs of microbes cycle carbon and sustain biomes via the development and application of advanced mass spectrometry approaches and model laboratory ecosystems (EcoFABs). … at the JGI. Click to learn more about the program's areas of focus, major initiatives and more.  …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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John Vogel
… years where he was a driving force behind the development of numerous genomic resources that fostered the widespread adoption of Brachypodium distachyon as an experimental model for the … collaboration with industrial partners, generated hundreds of transgenic switchgrass lines in an effort to create …
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Mapping the Earth’s Hidden Fungal Kingdom
… Leveraging massive comparative genomics to decode millions of mystery genes and lay a future-ready foundation     Over … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … entirely new capabilities through partnerships with bacterial symbionts, and how others revolutionized their …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … with the HudsonAlpha Institute for Biotechnology.   Publications Grimwood, J., Gordon, L., Olsen, A. et al. The …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… Interns contributed to a number of projects, from refining lab protocols at the bench to applying artificial intelligence to aspects of research questions Another intern summer has closed at … Liu Project:  Promoter Characterization of the Bacillota Bacterial Phylum Saray Maeda Mentors: Jonelle Basso, Heejung …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … The phyllosphere, which is known as the aerial surface of plants, is a comparatively understudied area of forest … forests and the atmosphere. The team learned that some bacterial families carry genes for degrading monoterpenes …
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to correlate protein annotations with ratios of DNA sequence fragments from the ecosystems. Selecting a … and an area’s environment hosts particular organisms and metabolisms. This implies that microbiome (metagenome) …
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