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Whole metagenome sequencing and 16S rRNA gene amplicon analyses reveal the complex microbiome responsible for the success of enhanced in-situ reductive dechlorination (ERD) of a tetrachloroethene-contaminated Superfund site
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described … a microbial mat. The Science In microbial mats, communities of microorganisms live among viruses that infect them. But … on the other hand, suggests that the virus is not rapidly replicating, but instead may be abiding in the host …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes and metagenomes (IMG). He became … Inc. in Chicago, IL. He did his postdoctoral studies with Carl Woese at the University of Illinois at … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… to advance foundational science, creating opportunities for the global research community. The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) has released … with the scientific and technological advances. As responsible stewards of public resources, the JGI also aims …
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Characterizing Communities: JGI Announces Latest CSP Portfolio
… to global oceans. Through the Community Science Program of the U.S. Department of Energy (DOE) Joint Genome … Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User … ecologies. Diatoms, Bowler’s proposal noted, are believed responsible for a fifth of the planet’s photosynthesis …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… Ancient  Chloroflexota s ditched their flagella and other traits when … . Research shows that flagella were lost in other forms of  Chloroflexota that adapted to marine environments … don’t have flagella, meaning they were lost in the evolutionary adaptation to marine environments. These …
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Pangenomics reveals alternative environmental lifestyles among chlamydiae
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An environmental bacterial taxon with a large and distinct metabolic repertoire
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Environmental predictors of electroactive bacterioplankton in small boreal lakes
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Silver age of GOLD introduces new features
… OnLine Database celebrates 25 years as a vital resource for data contextualization The Science Since its launch 25 … sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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The molecular dimension of microbial species: 3. Comparative genomics of Synechococcus strains with different light responses and in situ diel transcription patterns of associated putative ecotypes in the Mushroom Spring microbial mat
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Gut Fungi: Unexpected Source of Novel Chemicals
… The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from … that these expressed genes translated into expected proteins. That work was done in collaboration with the …
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