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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is … Area are also co-located in the IGB. Vision The vision of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office …
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Webinar: PhycoCosm Tutorial
… JGI’s  PhycoCosm data portal , an interactive collection of sequenced algal genomes, omics data and comparative … on, there are 7 genomes on NCBI but your portal has only 2 of them. A: Watch the video (above) for the answer provided … would it be possible to add a feature to look for synteny of the target genome with itself, to identify regions that …
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JGI Launches Latest Strategic Plan
… For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now …
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Improving the Cacao Genome and Phytozome
… fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s largest buyers of cocoa, is collaborating with others to develop healthier … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Integrating Experimentation with Data
… The JGI and EMSL are U.S. Department of Energy (DOE) Office of Science national scientific user facilities dedicated to … Click to view a downloadable copy of the sponsor prospectus … Keynote Speakers Jim Collins Massachusetts Institute of Technology Kristala Prather Massachusetts Institute of …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… Emerald Nash and mentor Jonelle Basso, Experimental Study of Root Colonization by Resident Phages of a Plant Growth Promoting Rhizobacterium Graduate Interns … and Frederik Schulz, Structure Prediction to Annotate Novel Viruses: the Case of Polintoviruses Josue Duque and mentor …
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Ben Bowen
… BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … T., Ruebel, O., Northen, T., & Bowen, B. (2015). Analysis of metabolomics datasets with high-performance computing and …
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A Plant Root Atlas for Tracking Developmental Trajectories
… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and … maps gene expression patterns in the  Arabidopsis root, profiling nearly 100,000 single root cells and combining the … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Deep‐sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill
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Succession in the petroleum reservoir microbiome through an oil field production lifecycle
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Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill
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Biocorrosive Thermophilic Microbial Communities in Alaskan North Slope Oil Facilities
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