Results

Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding
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Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A recent study shows that … and cell death. Immediately upon transfer, the experimental samples exhibited significant stress with a … annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds light on the …
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Honey Bee Gut Microbiota Divvy Up Dinner
Honey bees are invaluable pollinators — cupids of the plant world facilitating the remixing of genes in the next … that interested the authors was that an evolutionary analysis of  Bifidobacterium strains in honey bees and … including collecting and analyzing the honey bee gut metagenome, which was done with the help of the US …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut … characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal RNA gene … metabolism . And postdoctoral researcher Sara Calhoun, data scientist Stephen Mondo, and  Fungal and Algal program …
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A Grass Model to Help Improve Giant Miscanthus
Miscanthus  sequence offers insights into benefits of polyploidy … the perennial grass Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in …
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Katherine Louie
… joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages … nonpolar metabolite analysis, creation of large metabolite databases by running 1000s of metabolite standards, and … Sci Rep. 2013;3: 1656. … Education … Selected Publications …
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Viral community analysis in a marine oxygen minimum zone indicates increased potential for viral manipulation of microbial physiological state
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