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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science Fields of … cracked earth are becoming common images in many regions due to more extreme weather events such as heat waves, … Resources (ANR), US Department of Agriculture P­­lant Gene Expression Center, Pacific Northwest National …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… interdisciplinary delegation from the University of Duisburg-Essen (UDE), Germany with the aim of intensifying … institutions will give us the opportunity to advance unique scientific knowledge and address global challenges.”  During … genomics in support of DOE missions related to clean energy generation and environmental characterization and cleanup. …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… a versatile engineering system that allows scientists to conduct genome-wide screens and explore biosynthetic pathway. … domesticate some 60 strains, inserting into them a genetic sequence that acts as a “landing pad.” Mouncey adds, … this Lawrence Berkeley National Laboratory (Berkeley Lab) Newscenter story and this piece in  Current Opinion in …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… established and emerging scientists from academia, industry, and government organizations for three days of scientific presentation, interactive panel discussions, …
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Benjamin Cole
… their growth program, and on how plants coordinate their gene expression with light and temperature oscillations … In addition, Dr. Cole is focusing on how individual plant cells respond to their biotic environment using … of Cell Identity as an R package … Education … Selected Publications … Software …
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A Grass Model to Help Improve Giant Miscanthus
… (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … giant miscanthus literally towers over most researchers due to its prodigious capability for growth. While many … and more complex patterns of inheritance. The additional genes provided by these chromosomes can contribute to novel …
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JGI Announces 2025 New Investigator Portfolio
… of projects, including the genomic dynamics of biofuel-producing fungi, the effects of biochar on rhizosphere …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… up the toxic chemicals is commonly known as Enhanced Reductive Dechlorination (ERD.) It is dependent on the … Science Program , they were able to analyze the resulting metagenomic data. (Data from the project are available on … (NCRR) (5P20RR016480-12) and the National Institute of General Medical Sciences (NIGMS) (8 P20 GM103451-12) from …
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JGI announces 2024 New Investigator portfolio
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User Support Analysis Group
… of highly customized analysis workflows for new product types, to the development of automated analysis pipelines for standard sequencing products performed at scale. Our group also performs ‘proof-of …
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Effects of Polar Light Cycle on Microbial Food Web
Ocean long ago, this shift to archaea being the main producer doesn’t occur here. Understanding this fundamental … difference offers new insight into the primary producers fueling our planet’s biogeochemical cycles. Water … were collected over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
… of data with MetaHipMer2. And the National Energy Research Scientific Computing (NERSC) has another supercomputer, …
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