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The Surprising Structure of a Shrub Willow Sex Chromosome
… gametes in one individual. But some, including shrub willow  Salix purpurea , employ the evolutionary strategy we are far more familiar with: differentiating into male and female sexes. For the first time, the sex … shrub willow have been sequenced with sufficient resolution to analyze their structure. Scientists found both a gene …
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JGI@25: Building a Better Bean
… that showcase our collaborations and capabilities to enable great science that will help solve energy and … challenges. While a hill of beans may not seem to amount to much, the common bean (Phaseolus vulgaris) is … bean, identifying genes related to disease-resistance, flowering time, nitrogen metabolism, seed weight and …
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Three Join the JGI User Executive Committee
… month – Sneha Couvilion of Pacific Northwest National Laboratory, Chris Schadt of Oak Ridge National Laboratory and … Soil Microbiome SFA. She serves as Secretary within the Microbial Ecology Section of the Ecological Society of … biogeochemical cycles in soils and sediments and plant-microbial interactions in crops. He has been a PI or Co-PI …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… featured speakers who shared a look back at the JGI’s history, from its beginnings in the sequencing for the Human … JGI’s future. Find recordings and recaps of these talks below, starting with Ari Patrinos. The Genomics Arms Race Ari … manager in 2006 when the JGI transitioned from human to microbial genetics. Drell held the role until he retired in …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics program. Prior to … from seedling to maturity reveals biotic and metabolic responses. Proc. Natl. Acad. Sci. 116 (52) 27124-27132 … for Superior Performance 2008 CSIRO McMaster Visiting Fellowship Australia … Education … Selected Publications … …
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User Executive Committee Charter
… and the annual user meeting. The UEC also acts as a liaison to the user community and the broader scientific community … UEC responsibilities include: Make recommendations to the JGI regarding calls for proposals, including focus … timing, and proposal review process; Make recommendations to the JGI regarding technical capabilities offered, …
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Access to Rock Star Scientists
… of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of Plant-Microbial Interactions “The summer internship has further …     Mo Kaze, UC Merced JGI Mentor : Susannah Tringe, Microbial Systems Group “Everyone here is very kind and …
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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint … and involves more than 17 research groups. The team set out to characterize the transcriptome – the complete set of RNA … their conversation has been lightly edited and condensed below. Sarah Sharman:  What is the JGI Plant Gene Atlas? …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic … JGI Metabolomics Program , along with Jenny Mortimer, Director of Plant Systems Biology at the Joint BioEnergy … Q:  Any advice on normalizing metabolomic data from a whole microbial community, without having cell counts or …
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Trent Northen
… 2015, he founded what is now the JGI Metabolomics Program to provide advanced metabolomic methods available to JGI users.  Dr. Northen’s research is focused on using … 2019 doi.org/10.1038/s41564-019-0449-y … 2023 Fellow of the American Association for the Advancement of …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… link in the evolution and transition of fungi from aquatic to terrestrial habitats. The work is part of the JGI’s 1000 … genomic information for every family of fungi. In the following guest piece, JGI user Ying Chang in the Spatafora lab … known fossil record of land plants and evolved in early microbial biocrust environments.     … The U.S. Department …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
… and DNA Day on April 25. As both Earth and DNA are close to our JGI hearts, we’re highlighting genomic science research that feels especially relevant to living on a changing planet. Transcript for Audio   … leaf for photosynthesis.  ALISON:  Photosynthesis is what allows plants to make their own food from light and air — in …
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