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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running smaller assemblies — so we head there for a sense of what this supercomputing looks like. …
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Corals in Hot Water Get Help From Their Microbes
As waters warm due to climate change, corals are in mortal peril. But corals comprise …
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MGM Workshop at Fisabio Summer School
June 24-28: Module 2/Microbial Genomics & Metagenomics Workshop The workshop is … professionals of biology, biomedical research, the health sciences and related fields who are interested in learning … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics. …
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MGM Workshop at Fisabio Summer School 2025
Register here The workshop is addressed to students and professionals of biology, biomedical research, the health sciences and related fields who are interested in learning … and seminars as well as practical hands-on sessions in bioinformatics and biostatistics Several sessions will be devoted …
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From Textbook to Real World Applications
When local students Maya Hanck of Carondelet High School and Tim Kostolansky of De La …
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The Big Deal About Short Plants
Despite their diminutive stature, “short plants” such as mosses could be uniquely powerful in helping scientists …
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A Redesign for Yeast’s Genome, Chromosome by Chromosome
To engineer yeast to do more, and understand genomes in general, Jef Boeke, Weimin Zhang (NYU Langone …
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W. Berkeley Kauffman
Berkeley is responsible for receiving and processing user samples. His R&D work focuses on the … utilizing a variety of technologies to improve the JGI’s capabilities in the areas of metagenomics, …
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Overview of the Genomes OnLine Database (GOLD)
TBK Reddy gives an overview of the JGI's Genomes OnLine Database and why curated metadata matters. …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to …
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Gotta Catch 'Em Gall
Kasey Markel and Patrick Shih (UC Berkeley and the Joint BioEnergy Institute) are looking for new ways to engineer plants. So they’ve looked into … how this project unfolded, and how they worked with the JGI's metabolomics program to find out more about these …
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