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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Berkeley Lab. In addition to … Yasuo Yoshikuni, head of the JGI’s DNA Synthesis Science program, underscored the value of taking a look at the AT … metabolism, this team built a phylogenetic tree using bioinformatic software called FastTree and identified 62 …
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Leo Baumgart
… technologies, integrating automated liquid handling and bioinformatics pipelines to transition bench-scale methods into … sites and which has been applied to a wide range of JGI user science projects spanning bacteria, fungi, and plants. His … of California, San Diego Postdoctoral training in bioinformatics, Lawrence Berkeley National Lab …
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Metabolomics
…   Metabolomics strengthens -omics technologies at the JGI by identifying the actual molecules present in an … systems, sheds light on nutrient cycling, and leads to the discovery of new molecules and pathways. The JGI … Find more details on the instrumentation we use and our methodology for …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… presentation, interactive panel discussions, workshops, and informal networking events. JGI will present both a genome … and a tech talk. Stop by the JGI booth to learn about our user programs and how we can help advance your science. …
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Tina Clarke
… Ms. Clarke joined the Lab in 2007 as the Sr. Human Resources … Genome Institute (JGI). Tina serves in an HR advisory role to Division/Area management and supervisors to recommend … of the Berkeley Lab’s first Conflict Resolution Services Program and supporting a healthy organizational culture.   …
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Long-term excess nitrogen fertilizer increases sensitivity of soil microbial community to seasonal change revealed by ecological network and metagenome analyses
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions
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Predominant Acidilobus-Like Populations from Geothermal Environments in Yellowstone National Park Exhibit Similar Metabolic Potential in Different Hypoxic Microbial Communities
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Soil compartments (bulk soil, litter, root and rhizosphere) as main drivers of soil protistan communities distribution in forests with different nitrogen deposition
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Crysten Blaby-Haas
… Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley Lab. She is spearheading the … engineering. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging …
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