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Low-abundance populations distinguish microbiome performance in plant cell wall deconstruction
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Reference-free structural variant detection in microbiomes via long-read co-assembly graphs.
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Quantitative genetic-by-soil microbiome interactions in a perennial grass affect functional traits
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metagRoot: a comprehensive database of protein families associated with plant root microbiomes
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STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies
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A Sorghum Pangenome Opens More Doors to Discovery
… decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a … on sorghum has focused on producing high-quality reference genomes. By cataloguing a genome sequence for a line of … Danforth Plant Science Center. Collaborators benefitted from sequencing resources as part of the Community Science …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … sequence of the complex switchgrass genome , using samples from common gardens growing across the country. The national … the first time. A 2020 Nature Genetics paper describing the genomes of the five major cotton lineages. Grimwood was also …
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JGI@25: Fueling Investigation into Methane-Making Microbes
… one-third of human-created methane emissions actually come from livestock — specifically, from the methane-making … has partnered with researchers around the world to map out genomes of rumen microbes. In 2018, through a JGI Community … rumen microbes gave researchers access to a collection of novel enzymes — many of which contained interesting …
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Microbial drivers of methane emissions from unrestored industrial salt ponds
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Proteome profile of the endomembrane of developing coleoptiles from switchgrass (Panicum virgatum)
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Purifying the Impure: Sequencing Metagenomes and Metatranscriptomes from Complex Animal-associated Samples
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Deep‐sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill
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