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Metagenome-assembled genomes from microbial communities producing lactic acid from dairy residues
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The relationship between gene traits and transcription in soil microbial communities varies by environmental stimulus
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IMG/M: a data management and analysis system for metagenomes
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… JGI-supported project studying the world’s rivers and their microbial communities. He’s focusing on the Arkansas River … in how general environmental stressors, um, alter microbial biomass and then what the consequences are for the … our agricultural systems could become more sustainable through applications of microbiome science; our water …
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JGI Announces FY26 Large Scale Portfolio for Our Community Science Program
… Scale call. This portfolio accelerates bioenergy innovation through genomic discovery across diverse organisms and … and developing RNA barcoding systems to optimize microbial bioreactors. This genomic research creates new … to unravel functional capabilities of plants, microbes and microbial communities, and understanding of natural …
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Mapping the Earth’s Hidden Fungal Kingdom
…     Over the past billion years, fungi have spread quietly throughout our planet. From the deepest ocean floors to … into an estimated 2–6 million species — dwarfing the diversity of plants. To put this evolutionary timescale in … species lies an even thornier problem: The genomes already sequenced don't adequately capture the vast nature of …
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Symbiotic Burkholderia Species Show Diverse Arrangements of nif/fix and nod Genes and Lack Typical High-Affinity Cytochrome cbb3 Oxidase Genes.
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Host population diversity as a driver of viral infection cycle in wild populations of green sulfur bacteria with long standing virus-host interactions
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Comparative Analyses of Four Reference Genomes Reveal Exceptional Diversity and Weak Linked Selection in the Yellow Monkeyflower (Mimulus guttatus) Complex
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Hyperdiverse, bioactive, and interaction-specific metabolites produced only in co-culture suggest diverse competitors may fuel secondary metabolism of xylarialean fungi.
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Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth
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Cataloging the Microbes that Manage the Health of River Systems
… a recent Nature paper , researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the … this may be the first publicly available, river-focused microbial resource that provides information at multiple … of these systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State …
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