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Filling in the Plant Tree of Life
What if we understood plants and how they adapt to their ever-changing … crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …
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Tanja Woyke Elected to American Academy of Microbiology
Congratulations to the JGI’s Tanja Woyke , who has been elected to the American Academy of Microbiology (AAM) ! She is among the 68 new Fellows in … Lab’s 2015 Women @ the Lab honorees. Woyke’s research focuses on developing and harnessing single-cell methods to …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a … Phakopsora pachyrhizi , a major pathogen of soybean that causes ASR.  “I love working with these guys,” said Duplessis, … and that’s going really well. And having the sequence data available for us to enable that research will have a …
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Building Sphagnum Genomic Resources
Sphagnome data would enable researchers’ insights on their potential … Science Program (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on carbon cycling studies, rather than for food or fuel …
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JGI & KBase at PAG XXVII
Biology Knowledgebase (KBase) will be at Booth 509. Stop by and chat with representatives from KBase and the JGI … with the JGI Community Science Program, and how you can use the KBase system to accelerate your plant genomics research. Click here to download a list of talks relevant to JGI science at PAG XXVII. On January …
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PhycoCosm Tutorial
… more about PhycoCosm, the largest interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint … (JGI), a US Department of Energy Office of Science user facility at Berkeley Lab. Presented by Igor Grigoriev, …
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2023 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide advanced genomic capabilities, large-scale data, and professional expertise to support the global …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, keen … those genomes, is rising. The purpose of this Workshop is to illustrate the expansion of this field and bring it to … with the JGI Community Science Program and how you can use the KBase system to accelerate your plant genomics …
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Graduate Students Get Thesis Research Opportunity at the JGI
Twice a year, the DOE Office of Science Graduate Student Research (SCGSR) program … at one of the DOE national laboratories or national user facilities. As a result of the latest call , a total of … to work with JGI virus researchers and harness the IMG/VR database. “The SCGSR award will further my goal of resolving …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working … Transcriptomes of Rice and Arabidopsis Roots … Making Big Data Metagenomic Clustering Scalable … Cataloging Lineage Specific Conserved Genes in Giant Viruses … Pan-genome Graphs: Approaches for Complete …
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Dispatches From JGI Interns
Program invites undergraduate and graduate students to engage in real, impactful research projects with JGI mentors. In this episode, hear two interns from the 2021 cohort … deep dives into genomics, computational tools, and big data.  …
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From Competition to Cooperation
Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … walls, while brown rot cannot break down the lignin but use cellulose. Finally, there are soil saprotrophs, which … generated by the JGI more than a decade ago. Having these datasets will assist researchers in moving toward functional …
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