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High-Quality Draft Genome Sequences of the Uncultured Delta3 Endosymbiont (Deltaproteobacteria) Assembled from Metagenomes of the Gutless Marine Worm Olavius algarvensis
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… the International Committee on Systematics of Prokaryotes. Due to the ongoing pandemic, Woyke will receive the prize at … techniques including single-cell genomics and metagenomics. They cited her “landmark” 2013 Nature paper , … a 2014 Berkeley Lab Director’s Award for Exceptional Scientific Achievement , and was among the Lab’s 2015 Women …
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Clarence Le
… novel clades of RNA viruses and determines novel viral gene functions that may impact hosts and host populations. …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and …
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SPRUCE-ing Up Science
… the HudsonAlpha Institute for Biotechnology, and Duke University, published their research related to how … in machine learning. Despite working alongside his scientific idols, Lawrence recalls feeling very comfortable. … said. Wang, a vocal advocate on the importance of giving scientific presentations, maintains this expectation of his …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… teems beneath your feet. Both bacteria and fungi have genes that can break down plant fibers. But are they both … nitrous oxide). Summary To do this work, the international scientific team led by Petr Baldrian of the Czech Academy of … and metatranscriptome sequences, as well as individual reference fungal genome sequences assembled as part of …
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Metagenome Sequence Analysis of Filamentous Microbial Communities Obtained from Geochemically Distinct Geothermal Channels Reveals Specialization of Three Aquificales Lineages
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Kjiersten Fagnan
… subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 Dr. Fagnan became the … Opioid Epidemic: Determining the Epistatic and Pleiotropic Genetic Architectures for Chronic Pain and Opioid … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… than 5,000 data sets of RNA sequences (metatranscriptomes) generated from diverse environmental samples around the … cell death and/or profound changes in the cell physiology during infection.” While all RNA viruses have a gene that … information fully free and openly available to the broader scientific community.” Uri Gophna from Tel Aviv University, …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
… symbiotic interactions are difficult to study in the lab. Metagenomics provides new views of these relationships.  … Then, using metagenomes and metatranscriptomes generated by the U.S. Department of Energy (DOE) Joint … Lawrence Berkeley National Laboratory’s Sustainable Systems Scientific Focus Area funded by the US Department of Energy …
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Daniel Udwary
… of bioinformatics tools for elucidation of biosynthetic gene clusters in bacteria and fungi. Prior to joining the … podcast, a "fireside chat"-style podcast about natural products and the science and scientists of secondary … (1996) … List available on Google Scholar … Education … Publications …
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