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Genome-resolved correlation mapping links microbial community structure to metabolic interactions driving methane production from wastewater
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … habitats. The work is part of the JGI’s 1000 Fungal Genomes Project, which aims to provide genomic information for every … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Marine Synechococcus isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
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Access to Rock Star Scientists
… Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. … to know you and provide all resources to excel in your project.”     Vicente Ramirez, UC Merced JGI Mentor: Albert …
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JGI Earth Month: Wetlands Work in #TenHundredWords
… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both Earth and DNA … Graduate Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane … of Science User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Bacterial enzymes play second fiddle to those from fungi when it comes to breaking … to identify proteins, the team compiled DNA sequences (metagenomes) and messenger RNA sequences (transcriptomes) from … sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, Baldrian’s team …
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JGI on the 2020 Highly Cited Researchers List
… Congratulations to the 2020 Highly Cited Researchers at the … Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, … to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples around the …
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Four Researchers Join JGI User Executive Committee
… of Energy user facility located at Lawrence Berkeley National Laboratory. Holly Bik of the University of Georgia, … Program over the past decade in gene regulatory network projects supported by the CSP, and as part of microbiome … the broader community. Eisen has been involved in many JGI projects, both as a CSP PI and as a collaborator. He …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a … 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of … reference genome for every family of fungi, the 1000 Fungal Genomes initiative of the U.S. Department of Energy (DOE) …
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Axel Visel
… in 2010. As the Deputy for Science Programs, he focuses on the development and implementation of strategic initiatives at the JGI. Dr. Visel received … for elucidating the gene regulatory landscape of vertebrate genomes, which led to the discovery of thousands of genetic …
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Functional Insights of Salinity Stress-Related Pathways in Metagenome-Resolved Methanothrix Genomes
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Metagenome-assembled genomes of phytoplankton microbiomes from the Arctic and Atlantic Oceans
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