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… Analysis of haloarchaeal metagenomes broadens understanding of … are available through JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) platform. These data allowed researchers … infections and are important for virus-host interactions. Analysis of strain variation showed that haloarchaea …

… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. Viruses play … -Mike Wilkins, Colorado State University GI users and microbiome researchers Mike Wilkins and his graduate student …

… genomes, researchers were able to carry out a broader analysis than had ever been done before to look at how … relationships outside of the root cells) lineages. To learn why, researchers analyzed 135 fungal genomes representing … genomes. With so many fungal  genomes , the team conducted a large-scale comparison, charting several changes …

… just one research proposal. Guest speaker Michelle O’Malley of UC Santa Barbara talked about how her approved FICUS … support, how much help can users expect for data analysis of the different omics analysis? Are users expected to be trained to handle the … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… Joint Genome Institute (JGI) provide access to a variety of tools that leverage stable isotopes to measure carbon and … at JGI and EMSL such as DNA-SIP, Protein SIP, Flux Balance analysis with metabolites, Isotope Ratio Mass Spectrometry, … Q: With EMSL’s real-time trace gas monitoring, can this be conducted while you’re doing a 13CO2 plant labeling …

… A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey at Duke University and … collaboratively developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be … integrated high-throughput sequencing and computational analysis that enable systems-based scientific approaches to …

… A workflow for capturing the genetic make-up of specific uncultivated microbes from complex environmental … deployed a pipeline to first target cells from communities of uncultivated microbes, and then efficiently retrieve and … be sequenced. Their protocol,  detailed in the journal  Microbiome , combines multiple techniques and was …

… and integrating mathematics and chemistry for advanced analysis, modeling, and data integration. Dr. Bowen’s … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab …

… genome data, unlocking new potential for AI-driven studies of energy metabolism. The Science Researchers produced … evolutionary processes. The team then extended their analysis beyond the reference set, using two additional … systems for energy and other applications. All annotations, comparative tools, and visualizations are publicly available …

… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was … approved through the JGI Community Science Program, to use microbiome science to help make plants more resilient to …

… April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … to living on a changing planet. Mo Kaze is a University of California (UC), Merced graduate student working with  … Canal System,” focuses on anthropogenic impacts on wetland microbiome composition and metabolism, work on which she is …