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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … Metabolic Engineering Approach for Rapid Prototyping of Genes and Pathways” at the JGI Annual Genomics of Energy & …
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Polar Phytoplankton Need Zinc to Cope with the Cold
Antarctic algae need their vitamins; zinc fuels some of their most important functions. Even in the chilly waters … peering into the function and activity of phytoplankton genes and looking at how communities of these microalgae … bioenergy and biomanufacturing. The JGI Algal Program makes genomes and multi-omics data from JGI CSP projects publicly …
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ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies
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BIGMAC : breaking inaccurate genomes and merging assembled contigs for long read metagenomic assembly
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Dan Rokhsar
… directed towards the sequencing, annotation, and analysis of three human chromosomes. After successful completion of … and evolutionary analysis of over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics … IBM Watson Research Center, Yorktown Heights, NY … Publications … 2018 Marthella Foskett Brown Chair, …
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Complete Genome of the Cellulolytic Ruminal Bacterium Ruminococcus albus 7
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2024 Progress Report
… for a sustainable bioeconomy. Mission  As a U.S. Department of Energy Office of Science user facility, we provide … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to … The organisms on our planet encode these functions in their genomes, and the JGI is uniquely positioned to combine …
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JGI Scientists Pen Genome Watch Articles
… more to come in 2020. Researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … “Given the great expertise in microbial genomics and metagenomics of the microbiology-focused groups at the Joint … move toward characterizing the human microbiome  by its genomes and metagenome , rather than just by 16S ribosomal …
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Eelgrass Proves to Be Much Younger Than We Thought
… less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … assumed, due to the wide and varied geographic footprint of the plant, that eelgrass began colonizing the oceans  … years ago, when eelgrass traveled across the ocean current from Japan to colonize the southern California and Mexican …
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Single‐parent expression drives dynamic gene expression complementation in maize hybrids
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IMG-ABC v.5.0: an update to the IMG/Atlas of Biosynthetic Gene Clusters Knowledgebase
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CRAGE enables rapid activation of biosynthetic gene clusters in undomesticated bacteria
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