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Oleaginous Yeast Biology Elucidated With Comparative Transcriptomics
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Comparative genomics of Aspergillus nidulans and section Nidulantes
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Pinning Down a Piece of Photosynthesis
… and longtime JGI collaborator Sabeeha Merchant’s group. In 2011, they inventoried a swath of blueprints to find parts … or DRI for short.  A kaleidoscope of structure-function data To study DRI experimentally, Blaby-Haas, Grosjean and … facilities that we worked with are cutting edge in terms of analysis and the fascinating results that we managed to …
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Neha Varghese
… benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for … science and projects through implementation of advanced analysis pipelines and tools as well as development and …
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Triggering Morel Fruiting
… because they influence geochemical cycling in forest ecosystems. By deciphering the fruiting-related decomposition … assimilated carbon into the soil, reducing the amount of CO2 emissions from decaying leaves and woods into the … in the wild, this technique provides a highly reproducible system which allows the black morel to complete its …
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Ian Blaby
… Since 2019 Dr. Blaby heads the Biodesign Platform at the Joint … strain engineering and bioinformatic tool development/data analysis for synthetic biology and functional genomics. … journal . 14: 1, 22-28. 2016 Blaby et. al., Genome‐wide analysis on Chlamydomonas reinhardtii reveals the impact of …
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iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria
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A multifunctional sesquiterpene synthase integrates with cytochrome P450s to reinforce the terpenoid defense network in maize
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What Happens Underground Influences Global Nutrient Cycles
… DOE user facilities EMSL and JGI announce FY 2020 collaborative FICUS projects. Through the Facilities … Focus Area (SFA), supported by the Terrestrial Ecosystem Science (TES) program within the DOE Office of … Tfaily of the University of Arizona. Her team aims to use data from an interdisciplinary field campaign taking place …
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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Igor Grigoriev
… Dr. Grigoriev joined the JGI in 2003, following his postdoctoral training at UC Berkeley and … to the Human Genome Project and led annotation and analysis of diverse eukaryotic genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which …
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Metatranscriptomic array analysis of ‘Candidatus Accumulibacter phosphatis’‐enriched enhanced biological phosphorus removal sludge
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