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Emiley Eloe-Fadrosh
… pursue her research interests in microbial ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and environmental samples to identify and … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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Fishing for Novel Cellulose Degraders
A “bait and hook” single-cell genomic approach to bioprospecting. The Science One of the most vital pieces of equipment for fly fishing is a … program (LDRD) entitled ‘Tackling microbial-mediated plant carbon decomposition using “function-driven” genomics’. …
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Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
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Multi 'omics comparison reveals metabolome biochemistry, not microbiome composition or gene expression, corresponds to elevated biogeochemical function in the hyporheic zone
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Ian Blaby
Since 2019 Dr. Blaby heads the DNA synthesis platform at the Joint Genome … National Laboratory where he focused on functional genomics of phototrophs. Through this and post-doctoral positions at … Award for Research Excellence … Education … Selected Publications … Awards and Honors …
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Marine Microbe Contains Multitudes
… microbial genomics reveals one bacterial species is made of four ecologically distinct groups with different … community genomes and expressed gene transcripts (metagenomes, metatranscriptomes), as well as the genomes of … , and relying on the JGI Integrated Microbial Genomes & Microbiomes (IMG/M) system . By analyzing the metagenomes, …
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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi … project was supported by a grant from Santa Barbara Cottage Hospital and the University of California, Santa Barbara …
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Eelgrass Proves to Be Much Younger Than We Thought
Recent study shows eelgrass has been around about 2.5 million years less than previously believed.  The Science Eelgrass, one of the most abundant plants in the ocean, originated in … (CSP 502951, 2016, Population and evolutionary genomics of host–microbiome interactions in Zostera marina and other …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… effort. The Science In 1999, the Environmental Protection Agency declared the North Railroad Avenue Plume (NRAP) a … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … to access the JGI’s  Integrated Microbial Genomes and Microbiomes (IMG/M) system. For example, the team has since …
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JGI@25: From Life at the Extremes to Editing Genomes
Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly accessible metagenomic datasets from a wide variety of ecosystems around … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V …
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User Programs
For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in … understand — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and …
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