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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Complete genome sequence of Thioalkalivibrio paradoxus type strain ARh 1T, an obligately chemolithoautotrophic haloalkaliphilic sulfur-oxidizing bacterium isolated from a Kenyan soda lake
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Draft genome sequences of two bacterial type strains isolated from a methanogenic bioreactor: Ruminiclostridium sufflavum DSM 19573T and Anaerosphaera aminiphila DSM 21120T
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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JGI announces 2025 Functional Genomics awardees
… [ Pictured from left: [Above] Hao Chen, Matthew Cope-Arguello, Theophilus Olufemi Isimikalu, Todd H. Oakley, BJ Philmus and Aaron M. Roshotte; [Below] … functions allows researchers to use them for engineering applications in support of advancing the bioeconomy. This …
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Mike Sneddon
… annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … and AI for large-scale genomics and lab informatics. Prior to joining JGI in late 2025, he served as Director of … earned his PhD in Computational Biology and Bioinformatics from Yale University. …
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Len Pennacchio
… has focused on applying state-of-the-art molecular methods to address wide-ranging questions existing in biology. He … at UC Berkeley. Dr. Pennacchio received his Ph.D in 1998 from the Department of Genetics at Stanford University where … by DOE and through continued competitive grant support from NIH. …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
… A nuanced understanding of peat moss drives insight into carbon storage   The Science Boggy peatlands, which hold … on Earth, peatlands store approximately one-third of the world’s soil carbon. The process to harvest energy-generating peat from these boggy wetlands produces an estimated 5% of annual …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and … respectively represent Mediterranean, temperate, and boreal forests.  Many different fungi appear in the soil … User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome analysis of … analysis as well as improving metagenome assemblies. Q&A from the Webinar: Input & sequencing Q(uestion): How much … A:  DNA modification detection can only be performed from “regular” PacBio, since the low-input protocol involves …
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Mapping Heat Resistance in Yeasts
… yeast Saccharomyces cerevisiae , allowing this species to grow better than its closest relative S. paradoxus at … can be harnessed for a wide range of biotechnological applications, including biofuel production. Efforts such as … our understanding of fungal diversity by sequencing genomes from across the fungal Tree of Life, but they also highlight …
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