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You Can Move, But You Can’t Hide
… develop a tool to quickly and accurately identify mobile genetic elements like plasmids and viruses. The Science … U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at Lawrence Berkeley National … with more than 15 million viral genomes. It was also key to developing the first version of the  IMG Plasmid Resource …
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Exploring the Diversity of the American Prairie’s Switchgrass
… A tall native plant of the North American prairie, switchgrass ( Panicum … of scientists made an ambitious plan to begin to link the plant’s varying traits — height, biomass, hardiness to cold, etc. — to its genes. The undertaking took shovels, trucks — and more than …
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A Grass Model to Help Improve Giant Miscanthus
… (polyploidy) and insights into the dynamics of gene expression as it grows back vigorously year after year … miscanthus often appear in discussions of rapidly growing plants whose biomass can be renewably converted into energy … Institute, the DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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The Power of One, Amplified
… that species specific sets of single cells harbored mobile genetic elements that were missed within paired metagenome … of within species recombination, indicating variation in gene flow between the analyzed community members. The Impact … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts … biological resources drive processes, products, and services.  Advancing the bioeconomy will provide a wide range of … Leveraging the JGI’s expertise to grow in areas such as developing pathogen-agnostic detection and prediction …
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Analyses of expressed sequence tags from the maize foliar pathogen Cercospora zeae-maydis identify novel genes expressed during vegetative, infectious, and reproductive growth
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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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New and Improved: Eucalyptus Reference is Now Accessible
… genome for eucalyptus in the July edition of the journal G3 Genes | Genomes | Genetics , with significant advances … are 900 species of eucalyptus. The trees are fast-growing plantation crops that supply wood and fiber for various … to the efforts of the  U.S. Department of Energy (DOE) Office of Science Biological and Environmental Research program …
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Nandita Nath
… Nandita is involved in developing new methods to improve genome recovery from …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Duplications and losses of genes encoding known elements of the stress defence system of the Aspergilli contribute to the evolution of these filamentous fungi but do not directly influence their environmental stress tolerance
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A One-Stop Shop for Analyzing Algal Genomes
… data portal allows anyone to freely investigate the genes of more than 100 algae. The Science Interested in the … of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … analysis of fungal genomes, and Phytozome for comparing plant genomes. Kuo and Grigoriev encourage scientists to …
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