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ARBitrator: a software pipeline for on-demand retrieval of auto-curated nifH sequences from GenBank
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A Xyloglucan Backbone 6-O-Acetyltransferase from Brachypodium distachyon Modulates Xyloglucan Xylosylation
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Permanent Draft Genome Sequence of Desulfurococcus amylolyticus Strain Z-533T, a Peptide and Starch Degrader Isolated from Thermal Springs in the Kamchatka Peninsula and Kunashir Island, Russia
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High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1T (DSM 17521T) isolated from muddy waters of a drainage system in Chandigarh, India
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High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China
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Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park
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Computationally Classifying Fungal Lifestyles
Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … plant pathogens (blue) vs saprobes (green). (From Haridas S et al.  Studies in Mycology , 2020.) Using whole …
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An Age of CRAGE: Advances in Rapidly Engineering Non-model Bacteria
… that allows researchers to quickly modify diverse bacterial genomes. In 2019, the JGI’s Yasuo Yoshikuni and his team  … an important addition to the synthetic biologist’s toolkit: a technique for  c hassis (or strain)-independent  r ecombinase- a …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
This is where the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … PI on this project. “I view the program as an excellent platform to build collaborative research initiatives.” Yasuo … developed thousands of DNA constructs encoding a molecular tool to repress targeted genes in the organism. The team …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… other oceans. That zinc turns out to be extremely important for polar phytoplankton.  After peering into the function … researchers at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … on microalgal communities across different ocean latitudes from pole to pole, using metatranscriptome and metagenome …
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Scaling metagenome sequence assembly with probabilistic de Bruijn graphs
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Metagenomic insights into diazotrophic communities across Arctic glacier forefields
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