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… was recognized for “advances in sequence-based studies of microbial assemblies, revealing the roles of microbial … Environmental Genomics and Systems Biology Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony was held …

… uncultivated viruses. Following up on those guidelines, JGI researchers have now developed CheckV (pronounced … the genomes of these viruses and associate them with their microbial hosts. However, assembling viral genomes from … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the way to seed but prevent the seeds from falling,” said JGI Plant Program head Jeremy Schmutz , who is also a … mapping back to identify candidate genes.”  Through the JGI’s Community Science Program , sequences of several …

… Cas14 proteins discovered from JGI’s IMG/M database and biochemically characterized at UC … was made possible by mining the datasets in the Integrated Microbial Genomes and Microbiomes (IMG/M) suite of tools … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. The sequences …

… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  … Ecosystems (ARBRE) (ANR-11-LABX 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, …

… Matt is broadly interested in the interactions between microbial life and environment, and using metagenomics to study these complex natural systems. Microbial communities living in hard-to-reach places that …

… Researchers at the JGI develop a tool to quickly and accurately identify mobile … in soils and water. MGEs like viruses and plasmids drive microbial processes and evolution. This is because MGEs can … approach. The tool was employed to build version 4 of the JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 …

… The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … a secondary metabolites portal within the Integrated Microbial Genomes and Microbiomes (IMG/M) system known as … from isolate and metagenome data.   The SMC ( smc.jgi.doe.gov ) is designed with two main objectives. First …

… from UC Merced spent eight weeks working virtually with JGI mentors to investigate rigorous research projects, hone … year and continue working on their research project! The JGI-UC Merced internship program was founded in 2014 with … Evaluation of Binning Tools for Microbial Eukaryotes in Metagenomes …

… Microbial communities living near hydrothermal deep-sea … these vents, and underwater volcanoes,  researchers studied microbial communities across five oceanic regions. In doing … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …

… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and … to fit the needs of the dynamic environment that is JGI. Infrastructure built by his team is unbureaucratic and …

… and genomics to study endosymbiotic associations within microbial eukaryotes. He hopes to broaden our understanding …