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Accelerating Metagenomics Discoveries with Deep Learning
… the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of … such as  Mash and  BBsketch , whose lead developer is JGI software developer Brian Bushnell, no alignment-free … in order to create more useful tools for the bioinformatics community. Other work presented at the workshop included how …
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JGI-KBase Panel at SACNAS
… of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get credit for their contributions to science. A panel of DOE researchers, program managers, and intern alumni will introduce projects …
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Georg Rath
… has been leading the Systems Infrastructure Team at the JGI since 2020. Before joining the JGI, he has been working on the boundary of life science and computational science with notable stops at … from JGI’s science and production sequencing programs. …
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Exploring Possibilities: 2022 JGI-UC Merced Interns
… internship experiences have influenced their careers in science. Hear more about what they learned from working with their JGI mentors, what challenges they overcame, and what new … valuable because in this time that I’ve been in my PhD program, I’ve been really focused with academia. And so this …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … sediments,” said Woyke, who also heads the JGI’s Microbial Program and is one of the article’s senior authors. The team …
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Atif Shahab
… led the development of an integrated platform for tracking JGI's sequencing projects and data warehousing. This … University of New South Wales, Australia; MS in Computer Science, University of New South Wales, Australia …
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Robert Bowers
… This includes studying the diversity, physiology and community ecology of microbes sampled from the natural …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Grimwood heads the Library Construction group for the JGI Plant Program . Her collaborations with the JGI began soon after … viridis ). The team of researchers at the Danforth Plant Science Center (Danforth Center), HudsonAlpha and the JGI …
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Biotech Partners
… Biotech Partners provides integrated and high-touch programs that empower underrepresented high school students …
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Expanding Horizons with the 2025 JGI-UC Merced Internship Cohort
… of Energy (DOE) Joint Genome Institute, a DOE Office of Science User Facility. This year, the 12th JGI-UC Merced cohort consisted of three undergraduate … One of the mentors, postdoc Yumary Vasquez, was herself a program alum from the 2022 cohort.  The UC Merced interns …
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Improving the Cacao Genome and Phytozome
… Organization (ICCO), global cocoa bean production in 2017-2018  was 4.6 million metric tons . The global chocolate … for comparative purposes on the latest version of the JGI plant portal Phytozome at  phytozome-next.JGI.doe.gov . One of the goals in updating the genome …
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Altered Expression of Two Small Secreted Proteins (ssp4 and ssp6) Affects the Degradation of a Natural Lignocellulosic Substrate by Pleurotus ostreatus
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