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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a … studied what happens to the tree’s physical traits and gene expression when the fungus is present. The Impact Black … changes in plant roots),  M. elongata  doesn’t have as many gene products that directly influence plant phenotype, such …
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Fungal Friends or Foes in Plant Roots
Uncovering associations between plant roots and fungi that can help … plant-associated fungi. Their analysis identified fungal gene families that help determine if these fungi act as … genomes on the JGI data portal MycoCosm . They looked for genes known to be involved in fungal-host interactions and …
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A Plantiful Future: Xiaohan Yang
Can plants help humans attain a renewable energy future? Can they help lock away more … Laboratory, believes they can. And, what’s more, that using gene editing technology to conscientiously mix traits of …
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JGI announces 2023 CSP Functional Genomics awardees
… research from potential users who need help translating genomic information into biological function. Through our CSP … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the six …
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JGI announces final round of 2022 Functional Genomics awardees
… research from potential users who need help translating genomic information into biological function. Through our CSP … and omics capabilities to enhance understanding of gene and genome function.  Below find a list of the final …
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JGI Workshop at SIMB NP Meeting
… and their biosynthetic logics to be understood, accessing these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, the complexity of …
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Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228PT)
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the … Camargo AP. et al. (2023) Identification of mobile genetic elements with geNomad. Nat Biotechnol . Epub. Neri … Thousands of Small, Novel Genes. Cell. 178(5):1245-1259. Publications on Pubmed | Google Scholar … Thomson Reuters …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… project to form new connections between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — … in four forest ecosystems, extracted RNA to understand gene expression, and developed new tools to map that soil …
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What Happens Underground Influences Global Nutrient Cycles
… 2020 collaborative FICUS projects. Through the Facilities Integrating Collaborations for User Science (FICUS) program, … of the JGI’s Flagship genomes. She and her colleagues have generated a high-quality, phenotyped mutant library in … as the alga is colloquially known by researchers. A missing gene from this mutant library leads to photosynthetic …
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JGI announces 2024 Functional Genomics awardees
… genomics research from reseachers who translate genomic information into biological function. Through our CSP Functional … and omics capabilities to enhance understanding of gene and genome function. Tapping into these functions …
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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth … short audio production, we’ll hear from Karolina Heyduk, an evolutionary plant biologist at the University of Hawai’i at … off our conversation with a quick recap of how plants, in general, work. KAROLINA:  We all know plants take up water …
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